Usage:
  abi-dump [options] [ -A ] <accession>
  abi-dump [options] <path>

  -A|--accession <accession>       Replaces accession derived from <path> in filename(s) and deflines

Options:

  -O|--outdir <path>               Output directory, default is '.'
  -N|--minSpotId <rowid>           Minimum spot id
  -X|--maxSpotId <rowid>           Maximum spot id
  -G|--spot-group                  Split into files by SPOT_GROUP (member name)
  --spot-groups <[list]>           Filter by SPOT_GROUP (member): name[,...]
  -R|--read-filter <[filter]>      Split into files by READ_FILTER value
                                   optionally filter by a value: pass|reject|criteria|redacted
  -T|--group-in-dirs               Split into subdirectories instead of files
  -K|--keep-empty-files            Do not delete empty files
  --table <table-name>             (New) Table name within SRA format, default is SEQUENCE

  -h|--help                        Output a brief explantion for the program
  -V|--version                     Display the version of the program then quit
  -L|--log-level <level>           Logging level as number or enum string
                                   One of (fatal|sys|int|err|warn|info) or (0-5)
                                   Current/default is warn
  -v|--verbose                     Increase the verbosity level of the program
                                   Use multiple times for more verbosity

Format options:

  -M|--minReadLen <len>            Minimum read length to output, default is 25
  -W|--noclip                      Do not clip quality left and right for spot
  -F|--origfmt                     Excludes SRR accession on defline
  -B|--noDotReads                  Do not output reads consisting mostly of dots