HMSBEAGLE  1.0.0
beagle::cpu::EigenDecompositionSquare Member List
This is the complete list of members for beagle::cpu::EigenDecompositionSquare, including all inherited members.
EigenDecomposition(int decompositionCount, int stateCount, int categoryCount, long flags) (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [inline]
EigenDecompositionSquare(int decompositionCount, int stateCount, int categoryCount, long flags) (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare
firstDerivTmp (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
gEigenValues (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
gEMatrices (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [protected]
gIMatrices (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [protected]
isComplex (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [protected]
kCategoryCount (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
kEigenDecompCount (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
kEigenValuesSize (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [protected]
kFlags (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
kStateCount (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
matrixTmp (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
secondDerivTmp (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [protected]
setEigenDecomposition(int eigenIndex, const double *inEigenVectors, const double *inInverseEigenVectors, const double *inEigenValues) (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [virtual]
updateTransitionMatrices(int eigenIndex, const int *probabilityIndices, const int *firstDerivativeIndices, const int *secondDerivativeIndices, const double *edgeLengths, const double *categoryRates, REALTYPE **transitionMatrices, int count) (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [virtual]
~EigenDecomposition() (defined in beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC >)beagle::cpu::EigenDecomposition< BEAGLE_CPU_EIGEN_GENERIC > [inline, virtual]
~EigenDecompositionSquare() (defined in beagle::cpu::EigenDecompositionSquare)beagle::cpu::EigenDecompositionSquare [virtual]